Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12010 and 12011 are separated by 487 nucleotides12011 and 12012 are separated by 1327 nucleotides12012 and 12013 are separated by 990 nucleotides12013 and 12014 are separated by 1974 nucleotides mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232,262 to 233,977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234,465 to 241,327 12011 mRNA_3644: 12012 - Hypothetical Protein, at 242,655 to 243,950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244,941 to 247,626 12013 mRNA_3646: 12014 - Hypothetical Protein, at 249,601 to 250,328 12014
Group Condition mRNA_3642 mRNA_3643 mRNA_3644 mRNA_3645 mRNA_3646
12010 12011 12012 12013 12014
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.6 +0.1 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.0 N.D. -0.2
auxotrophy Dropout Complete N.D. -0.2 +0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.5 N.D. +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.1 N.D. -0.2
auxotrophy YNB Glucose N.D. +0.0 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.2 N.D. -0.1
growth on oleic acid YNB Glucose N.D. +0.0 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.3 N.D. -0.1
growth on ypd YPD N.D. -0.2 +0.7 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.2 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.7 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 +0.7 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 +0.5 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.2 N.D. +0.9
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 +0.7 N.D. +0.8
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