Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12011 and 12012 are separated by 1327 nucleotides12012 and 12013 are separated by 990 nucleotides12013 and 12014 are separated by 1974 nucleotides12014 and 12015 are separated by 455 nucleotides mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234,465 to 241,327 12011 mRNA_3644: 12012 - Hypothetical Protein, at 242,655 to 243,950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244,941 to 247,626 12013 mRNA_3646: 12014 - Hypothetical Protein, at 249,601 to 250,328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250,784 to 251,947 12015
Group Condition mRNA_3643 mRNA_3644 mRNA_3645 mRNA_3646 mRNA_3647
12011 12012 12013 12014 12015
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.1 N.D. -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 N.D. -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 N.D. -0.2 -0.2
auxotrophy Dropout Complete -0.2 +0.2 N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.5 N.D. +0.3 +0.2
auxotrophy YNB Glucose +0.0 +0.1 N.D. -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 N.D. +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.3 N.D. -0.1 +0.3
growth on ypd YPD -0.2 +0.7 N.D. -0.1 +0.0
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. -0.1 +0.4
growth on oleic acid YNB Oleic Acid -0.2 +0.5 N.D. -0.2 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.7 N.D. -0.0 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.7 N.D. +0.8 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.7 N.D. -0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 N.D. +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.2 N.D. +0.9 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 N.D. +0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.5 N.D. +0.3 +0.5
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