Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12012 and 12013 are separated by 990 nucleotides12013 and 12014 are separated by 1974 nucleotides12014 and 12015 are separated by 455 nucleotides12015 and 12016 are separated by 598 nucleotides mRNA_3644: 12012 - Hypothetical Protein, at 242,655 to 243,950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244,941 to 247,626 12013 mRNA_3646: 12014 - Hypothetical Protein, at 249,601 to 250,328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250,784 to 251,947 12015 mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252,546 to 253,342 12016
Group Condition mRNA_3644 mRNA_3645 mRNA_3646 mRNA_3647 mRNA_3648
12012 12013 12014 12015 12016
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.2 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.2 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.3 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.3 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 N.D. +0.3 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.1 -0.1 N.D.
auxotrophy Dropout Complete +0.2 N.D. -0.3 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.2 -0.3 N.D.
auxotrophy YNB Glucose +0.1 N.D. -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.1 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. -0.1 +0.4 N.D.
growth on ypd YPD +0.7 N.D. -0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.5 N.D. -0.2 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.2 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 N.D. -0.2 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. -0.0 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.9 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. +0.8 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. +0.2 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 N.D. +0.3 +0.5 N.D.
remove
mRNA_3644
plot		 remove
mRNA_3645
plot		 remove
mRNA_3646		 remove
mRNA_3647
plot		 remove
mRNA_3648
plot