Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12013 and 12014 are separated by 1974 nucleotides12014 and 12015 are separated by 455 nucleotides12015 and 12016 are separated by 598 nucleotides12016 and 12017 are separated by 599 nucleotides mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244,941 to 247,626 12013 mRNA_3646: 12014 - Hypothetical Protein, at 249,601 to 250,328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250,784 to 251,947 12015 mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252,546 to 253,342 12016 mRNA_3649: 12017 - HMMPfam-Protein of unknown function, DUF604-PF04646, at 253,942 to 255,854 12017
Group Condition mRNA_3645 mRNA_3646 mRNA_3647 mRNA_3648 mRNA_3649
12013 12014 12015 12016 12017
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.1 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.9 -0.0 N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.5 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.3 N.D. +0.5
growth on ypd YPD N.D. -0.1 +0.0 N.D. +0.4
auxotrophy Dropout Complete N.D. -0.3 +0.1 N.D. +0.5
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.6 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.2 N.D. +0.8
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.1 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.4 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.2 N.D. +1.0
auxotrophy YNB Glucose N.D. -0.1 +0.2 N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.2 N.D. +1.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.4 N.D. +0.1
growth on oleic acid YNB Glucose N.D. -0.1 +0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.5 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.5 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.8 -0.3 N.D. +1.4
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