Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12018 and 12019 are separated by 222 nucleotides
12019 and 12020 are separated by 632 nucleotides
12020 and 12021 are separated by 125 nucleotides
12021 and 12022 are separated by 5434 nucleotides
mRNA_3650: 12018 - Hypothetical Protein, at 256,801 to 258,115
12018
mRNA_3651: 12019 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 258,338 to 258,829
12019
mRNA_3652: 12020 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 259,462 to 260,271
12020
mRNA_3653: 12021 - KOG2437 Muskelin, at 260,397 to 263,923
12021
mRNA_3654: 12022 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 269,358 to 271,210
12022
Group
Condition
mRNA
_3650
mRNA
_3651
mRNA
_3652
mRNA
_3653
mRNA
_3654
12018
12019
12020
12021
12022
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-1.0
-0.1
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.1
-0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.4
+0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.5
+0.3
+0.1
-0.2
auxotrophy
Dropout Complete
-0.3
-0.2
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
-0.2
-0.0
+0.0
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.3
+0.0
+0.1
growth on ypd
YPD
-0.0
-0.2
-0.1
-0.0
-0.2
auxotrophy
YNB Glucose
-0.5
-0.3
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.4
-0.2
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
+0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
-0.2
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.4
+0.3
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.4
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.0
-0.5
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
+0.3
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.4
+0.0
+0.4
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
-0.4
+0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.2
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.5
-0.6
+0.6
-0.2
remove
mRNA_3650
plot
remove
mRNA_3651
plot
remove
mRNA_3652
remove
mRNA_3653
plot
remove
mRNA_3654
plot