Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12020 and 12021 are separated by 125 nucleotides12021 and 12022 are separated by 5434 nucleotides12022 and 12023 are separated by 217 nucleotides12023 and 12024 are separated by 30 nucleotides mRNA_3652: 12020 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 259,462 to 260,271 12020 mRNA_3653: 12021 - KOG2437 Muskelin, at 260,397 to 263,923 12021 mRNA_3654: 12022 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 269,358 to 271,210 12022 mRNA_3655: 12023 - KOG1721 FOG Zn-finger, at 271,428 to 272,912 12023 mRNA_3656: 12024 - Hypothetical Protein, at 272,943 to 273,266 12024
Group Condition mRNA_3652 mRNA_3653 mRNA_3654 mRNA_3655 mRNA_3656
12020 12021 12022 12023 12024
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.3 -0.1 -0.1 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.3 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.5 -0.1 -0.2 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.1 -0.3 -1.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.4 +0.0 +0.2 -1.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 -0.2 -0.0 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.0 -0.4 -0.3
auxotrophy Dropout Complete -0.1 -0.1 +0.1 -0.1 -0.6
growth on oleic acid YNB Glucose -0.3 +0.0 +0.1 +0.1 -0.7
growth on ricinoleic acid YNB Glucose -0.2 -0.0 +0.0 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 +0.1 -0.6
auxotrophy YNB Glucose +0.1 +0.0 +0.1 -0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.1 -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.4 +0.1 +0.3 -0.6
growth on ypd YPD -0.1 -0.0 -0.2 -0.3 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.0 -0.0 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.2 -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 +0.1 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 -0.2 -0.1 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.6 -0.2 +0.1 +1.6
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