Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12021 and 12022 are separated by 5434 nucleotides12022 and 12023 are separated by 217 nucleotides12023 and 12024 are separated by 30 nucleotides12024 and 12025 are separated by 161 nucleotides mRNA_3653: 12021 - KOG2437 Muskelin, at 260,397 to 263,923 12021 mRNA_3654: 12022 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 269,358 to 271,210 12022 mRNA_3655: 12023 - KOG1721 FOG Zn-finger, at 271,428 to 272,912 12023 mRNA_3656: 12024 - Hypothetical Protein, at 272,943 to 273,266 12024 mRNA_3657: 12025 - Hypothetical Protein, at 273,428 to 273,670 12025
Group Condition mRNA_3653 mRNA_3654 mRNA_3655 mRNA_3656 mRNA_3657
12021 12022 12023 12024 12025
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.2 -0.9 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 -0.1 -1.9 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.0 +0.2 -1.8 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 -0.3 -0.9 +0.7
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 -0.6 -0.7
auxotrophy Dropout Complete -0.1 +0.1 -0.1 -0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 -0.3 -1.0 +0.3
growth on oleic acid YNB Glucose +0.0 +0.1 +0.1 -0.7 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.2 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 -0.4 -0.3 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.0 -0.8 +1.2
growth on ricinoleic acid YNB Glucose -0.0 +0.0 -0.1 -0.4 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.1 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.1 +0.3 -0.6 +0.2
auxotrophy YNB Glucose +0.0 +0.1 -0.1 -0.6 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.4 +1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 -0.2 +0.6 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 -0.1 +0.6 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.2 +0.1 +1.6 -0.8
growth on ypd YPD -0.0 -0.2 -0.3 +0.5 +1.6
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