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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12022 and 12023 are separated by 217 nucleotides
12023 and 12024 are separated by 30 nucleotides
12024 and 12025 are separated by 161 nucleotides
12025 and 12026 are separated by 8570 nucleotides
mRNA_3654: 12022 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 269,358 to 271,210
12022
mRNA_3655: 12023 - KOG1721 FOG Zn-finger, at 271,428 to 272,912
12023
mRNA_3656: 12024 - Hypothetical Protein, at 272,943 to 273,266
12024
mRNA_3657: 12025 - Hypothetical Protein, at 273,428 to 273,670
12025
mRNA_3658: 12026 - Hypothetical Protein, at 282,241 to 283,121
12026
Group
Condition
mRNA
_3654
mRNA
_3655
mRNA
_3656
mRNA
_3657
mRNA
_3658
12022
12023
12024
12025
12026
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-1.9
-0.6
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.9
-0.7
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
-1.8
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.6
-0.7
+0.1
auxotrophy
Dropout Complete
+0.1
-0.1
-0.6
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
-0.9
+0.7
-0.0
growth on oleic acid
YNB Glucose
+0.1
+0.1
-0.7
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
-1.0
+0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
-0.0
-0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.0
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
-0.3
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
-0.4
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
-0.8
+1.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
-0.6
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.2
+0.1
-0.0
auxotrophy
YNB Glucose
+0.1
-0.1
-0.6
+1.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.4
+1.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
+1.6
-0.8
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
+0.6
+0.5
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
+0.6
+0.6
+0.1
growth on ypd
YPD
-0.2
-0.3
+0.5
+1.6
+0.1
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