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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12025 and 12026 are separated by 8570 nucleotides
12026 and 12027 are separated by 379 nucleotides
12027 and 12028 are separated by 757 nucleotides
12028 and 12029 overlap by 8 nucleotides
mRNA_3657: 12025 - Hypothetical Protein, at 273,428 to 273,670
12025
mRNA_3658: 12026 - Hypothetical Protein, at 282,241 to 283,121
12026
mRNA_3659: 12027 - Hypothetical Protein, at 283,501 to 284,501
12027
mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285,259 to 286,189
12028
mRNA_3661: 12029 - Hypothetical Protein, at 286,182 to 286,643
12029
Group
Condition
mRNA
_3657
mRNA
_3658
mRNA
_3659
mRNA
_3660
mRNA
_3661
12025
12026
12027
12028
12029
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.1
-0.1
-1.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
+0.2
+0.2
-0.9
-0.4
auxotrophy
Dropout Complete
-0.2
+0.0
+0.1
-0.2
-0.4
growth on oleic acid
YNB Glucose
-0.3
+0.1
+0.3
-0.4
-0.1
growth on oleic acid
YNB Oleic Acid
-0.7
+0.1
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.0
+0.1
-0.3
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.2
-0.1
+0.7
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.0
-0.0
+0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
+0.4
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.2
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.2
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.0
-0.0
-0.6
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.0
-0.0
+0.0
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.1
+0.5
-0.9
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.2
-0.1
-0.0
-0.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.1
+0.4
+0.0
auxotrophy
YNB Glucose
+1.0
+0.1
-0.0
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.1
+0.1
-0.1
-0.2
+0.0
growth on ypd
YPD
+1.6
+0.1
+0.2
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.1
+0.8
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
+0.5
+0.1
+0.8
+0.0
-0.1
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