Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12025 and 12026 are separated by 8570 nucleotides12026 and 12027 are separated by 379 nucleotides12027 and 12028 are separated by 757 nucleotides12028 and 12029 overlap by 8 nucleotides mRNA_3657: 12025 - Hypothetical Protein, at 273,428 to 273,670 12025 mRNA_3658: 12026 - Hypothetical Protein, at 282,241 to 283,121 12026 mRNA_3659: 12027 - Hypothetical Protein, at 283,501 to 284,501 12027 mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285,259 to 286,189 12028 mRNA_3661: 12029 - Hypothetical Protein, at 286,182 to 286,643 12029
Group Condition mRNA_3657 mRNA_3658 mRNA_3659 mRNA_3660 mRNA_3661
12025 12026 12027 12028 12029
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.1 -0.1 -1.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.2 +0.2 -0.9 -0.4
auxotrophy Dropout Complete -0.2 +0.0 +0.1 -0.2 -0.4
growth on oleic acid YNB Glucose -0.3 +0.1 +0.3 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.7 +0.1 -0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.0 +0.1 -0.3 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 -0.1 +0.7 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 -0.0 +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.4 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.2 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 +0.2 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.0 -0.0 -0.6 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.0 -0.0 +0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.1 +0.5 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 -0.1 -0.0 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.1 +0.4 +0.0
auxotrophy YNB Glucose +1.0 +0.1 -0.0 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 +0.1 -0.1 -0.2 +0.0
growth on ypd YPD +1.6 +0.1 +0.2 -0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.1 +0.8 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.5 +0.1 +0.8 +0.0 -0.1
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