Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12027 and 12028 are separated by 757 nucleotides12028 and 12029 overlap by 8 nucleotides12029 and 12030 are separated by 123 nucleotides12030 and 12031 are separated by 177 nucleotides mRNA_3659: 12027 - Hypothetical Protein, at 283,501 to 284,501 12027 mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285,259 to 286,189 12028 mRNA_3661: 12029 - Hypothetical Protein, at 286,182 to 286,643 12029 mRNA_3662: 12030 - KOG2768 Translation initiation factor 2, beta subunit (eIF-2beta), at 286,767 to 288,003 12030 mRNA_3663: 12031 - K01738 cysK cysteine synthase A, at 288,181 to 289,942 12031
Group Condition mRNA_3659 mRNA_3660 mRNA_3661 mRNA_3662 mRNA_3663
12027 12028 12029 12030 12031
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.9 -0.4 +0.0 -2.3
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.4 +0.2 -3.1
auxotrophy YNB Glucose -0.0 +0.0 -0.3 +0.0 -2.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.9 -0.1 +0.1 -2.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.6 +0.0 -0.1 -2.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.1 -0.2 -0.1 -3.3
growth on oleic acid YNB Glucose +0.3 -0.4 -0.1 +0.0 -2.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.2 -0.2 -0.1 -0.9
growth on ricinoleic acid YNB Glucose +0.8 +0.0 -0.1 -0.0 -2.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 +0.0 -0.1 -1.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 -0.6 -0.0 -0.5
auxotrophy Dropout Complete +0.1 -0.2 -0.4 +0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 -0.2 +0.3 -0.9
growth on ypd YPD +0.2 -0.3 -0.4 +0.1 -0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.2 +0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.3 -0.3 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 -0.2 -0.0 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.7 -0.5 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 -0.3 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 +0.1 +0.0 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.4 +0.0 +0.0 +0.5
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