Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12030 and 12031 are separated by 177 nucleotides12031 and 12032 are separated by 901 nucleotides12032 and 12033 are separated by 105 nucleotides12033 and 12034 are separated by 1647 nucleotides mRNA_3662: 12030 - KOG2768 Translation initiation factor 2, beta subunit (eIF-2beta), at 286,767 to 288,003 12030 mRNA_3663: 12031 - K01738 cysK cysteine synthase A, at 288,181 to 289,942 12031 mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290,844 to 292,094 12032 mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292,200 to 295,663 12033 mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297,311 to 299,921 12034
Group Condition mRNA_3662 mRNA_3663 mRNA_3664 mRNA_3665 mRNA_3666
12030 12031 12032 12033 12034
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 -4.4 +0.2 -3.3
growth on oleic acid YNB Glucose +0.0 -2.4 -4.2 -0.2 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -2.3 -4.1 -0.2 +0.5
growth on ricinoleic acid YNB Glucose -0.0 -2.8 -3.3 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.9 -4.5 +0.3 -1.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -3.1 -2.5 -0.3 +0.1
auxotrophy YNB Glucose +0.0 -2.9 -2.8 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -1.3 -2.1 -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -3.3 -0.6 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -2.6 -2.2 +0.1 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.9 -2.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -2.3 +0.1 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -1.7 -0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.3 -2.2 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +1.0 -1.7 -0.0 -0.4
growth on ypd YPD +0.1 -0.5 -0.1 +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.4 -0.5 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.5 -0.2 -0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.5 +0.9 -0.2 +0.6
auxotrophy Dropout Complete +0.0 -0.6 +1.7 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.5 +0.5 +0.1 -0.1
remove
mRNA_3662
plot
remove
mRNA_3663
plot
remove
mRNA_3664
remove
mRNA_3665
plot
remove
mRNA_3666
plot