Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12032 and 12033 are separated by 105 nucleotides12033 and 12034 are separated by 1647 nucleotides12034 and 12035 are separated by 233 nucleotides12035 and 12036 are separated by 121 nucleotides mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290,844 to 292,094 12032 mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292,200 to 295,663 12033 mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297,311 to 299,921 12034 mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300,155 to 301,036 12035 mRNA_3668: 12036 - K08870 TWF twinfilin, at 301,158 to 305,676 12036
Group Condition mRNA_3664 mRNA_3665 mRNA_3666 mRNA_3667 mRNA_3668
12032 12033 12034 12035 12036
facs on lipid accumulation Sorted High BODIPY Gate -4.4 +0.2 -3.3 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -4.5 +0.3 -1.1 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -4.1 -0.2 +0.5 N.D. +0.1
growth on oleic acid YNB Glucose -4.2 -0.2 +0.6 N.D. +0.1
growth on ricinoleic acid YNB Glucose -3.3 -0.1 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.1 -0.4 -0.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -2.5 -0.3 +0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.3 -0.1 -0.1 N.D. -0.1
auxotrophy YNB Glucose -2.8 -0.2 +0.5 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.7 -0.0 -0.4 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 +0.6 -0.2 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine -1.7 -0.1 +0.4 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.2 +0.1 +1.0 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.2 +0.0 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 -0.1 N.D. -0.1
growth on ypd YPD -0.1 +0.0 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.4 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 +0.3 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.9 -0.2 +0.6 N.D. +0.2
auxotrophy Dropout Complete +1.7 -0.3 +0.2 N.D. +0.1
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