Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12033 and 12034 are separated by 1647 nucleotides
12034 and 12035 are separated by 233 nucleotides
12035 and 12036 are separated by 121 nucleotides
12036 and 12037 are separated by 164 nucleotides
mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292,200 to 295,663
12033
mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297,311 to 299,921
12034
mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300,155 to 301,036
12035
mRNA_3668: 12036 - K08870 TWF twinfilin, at 301,158 to 305,676
12036
mRNA_3669: 12037 - KOG1756 Histone 2A, at 305,841 to 306,858
12037
Group
Condition
mRNA
_3665
mRNA
_3666
mRNA
_3667
mRNA
_3668
mRNA
_3669
12033
12034
12035
12036
12037
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-3.3
N.D.
+0.0
+0.9
growth on ypd
YPD
+0.0
-0.3
N.D.
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.3
N.D.
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
N.D.
+0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
N.D.
+0.0
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.0
N.D.
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-1.1
N.D.
-0.0
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
N.D.
-0.1
+0.1
auxotrophy
Dropout Complete
-0.3
+0.2
N.D.
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.4
N.D.
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.4
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose
-0.2
+0.5
N.D.
+0.1
+0.0
growth on oleic acid
YNB Glucose
-0.2
+0.6
N.D.
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
N.D.
-0.1
+0.9
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
N.D.
+0.2
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.2
N.D.
+0.4
+0.3
growth on oleic acid
YNB Oleic Acid
-0.2
+0.6
N.D.
+0.2
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.5
N.D.
+0.1
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+1.0
N.D.
+0.3
+0.1
remove
mRNA_3665
plot
remove
mRNA_3666
plot
remove
mRNA_3667
remove
mRNA_3668
plot
remove
mRNA_3669
plot