Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12034 and 12035 are separated by 233 nucleotides12035 and 12036 are separated by 121 nucleotides12036 and 12037 are separated by 164 nucleotides12037 and 12038 are separated by 170 nucleotides mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297,311 to 299,921 12034 mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300,155 to 301,036 12035 mRNA_3668: 12036 - K08870 TWF twinfilin, at 301,158 to 305,676 12036 mRNA_3669: 12037 - KOG1756 Histone 2A, at 305,841 to 306,858 12037 mRNA_3670: 12038 - HMMPfam-GRIP-related Arf-binding domain-PF10375,ProSiteProfiles-GRIP domain profile.-PS50913, at 307,029 to 308,993 12038
Group Condition mRNA_3666 mRNA_3667 mRNA_3668 mRNA_3669 mRNA_3670
12034 12035 12036 12037 12038
facs on lipid accumulation Sorted High BODIPY Gate -3.3 N.D. +0.0 +0.9 N.D.
growth on ypd YPD -0.3 N.D. -0.1 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.1 N.D. -0.0 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.0 -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.0 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. +0.1 +0.5 N.D.
auxotrophy Dropout Complete +0.2 N.D. +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.4 +0.3 N.D.
auxotrophy YNB Glucose +0.5 N.D. +0.1 +0.0 N.D.
growth on oleic acid YNB Glucose +0.6 N.D. +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 +0.9 N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.2 +0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.6 N.D. +0.2 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. +0.1 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 N.D. +0.3 +0.1 N.D.
remove
mRNA_3666
plot
remove
mRNA_3667
plot
remove
mRNA_3668
remove
mRNA_3669
plot
remove
mRNA_3670
plot