Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12035 and 12036 are separated by 121 nucleotides12036 and 12037 are separated by 164 nucleotides12037 and 12038 are separated by 170 nucleotides12038 and 12039 are separated by 314 nucleotides mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300,155 to 301,036 12035 mRNA_3668: 12036 - K08870 TWF twinfilin, at 301,158 to 305,676 12036 mRNA_3669: 12037 - KOG1756 Histone 2A, at 305,841 to 306,858 12037 mRNA_3670: 12038 - HMMPfam-GRIP-related Arf-binding domain-PF10375,ProSiteProfiles-GRIP domain profile.-PS50913, at 307,029 to 308,993 12038 mRNA_3671: 12039 - K07562 NMD3 nonsense-mediated mRNA decay protein 3, at 309,308 to 311,181 12039
Group Condition mRNA_3667 mRNA_3668 mRNA_3669 mRNA_3670 mRNA_3671
12035 12036 12037 12038 12039
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.6 N.D. N.D.
growth on ypd YPD N.D. -0.1 -0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.0 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.0 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.1 +0.0 N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 +0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.9 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.9 N.D. N.D.
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