Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12037 and 12038 are separated by 170 nucleotides12038 and 12039 are separated by 314 nucleotides12039 and 12040 are separated by 248 nucleotides12040 and 12041 are separated by 1450 nucleotides mRNA_3669: 12037 - KOG1756 Histone 2A, at 305,841 to 306,858 12037 mRNA_3670: 12038 - HMMPfam-GRIP-related Arf-binding domain-PF10375,ProSiteProfiles-GRIP domain profile.-PS50913, at 307,029 to 308,993 12038 mRNA_3671: 12039 - K07562 NMD3 nonsense-mediated mRNA decay protein 3, at 309,308 to 311,181 12039 mRNA_3672: 12040 - BLAST putative ribonuclease mrp protein subunit rmp1 [Diapo..., at 311,430 to 311,771 12040 mRNA_3673: 12041 - K11251 H2A histone H2A, at 313,222 to 314,004 12041
Group Condition mRNA_3669 mRNA_3670 mRNA_3671 mRNA_3672 mRNA_3673
12037 12038 12039 12040 12041
ypd buoyancy 40 hrs High Buoyancy -0.6 N.D. N.D. N.D. -0.2
growth on ypd YPD -0.3 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. N.D. N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. N.D. N.D. -0.5
growth on oleic acid YNB Glucose -0.0 N.D. N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.4 N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. N.D. +0.4
auxotrophy YNB Glucose +0.0 N.D. N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. N.D. -0.1
auxotrophy Dropout Complete +0.0 N.D. N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.9 N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 N.D. N.D. N.D. -0.1
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