Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12040 and 12041 are separated by 1450 nucleotides12041 and 12042 are separated by 535 nucleotides12042 and 12043 are separated by 477 nucleotides12043 and 12044 are separated by 1433 nucleotides mRNA_3672: 12040 - BLAST putative ribonuclease mrp protein subunit rmp1 [Diapo..., at 311,430 to 311,771 12040 mRNA_3673: 12041 - K11251 H2A histone H2A, at 313,222 to 314,004 12041 mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314,540 to 316,836 12042 mRNA_3675: 12043 - K11251 H2A histone H2A, at 317,314 to 317,987 12043 mRNA_3676: 12044 - K11833 USP2_21 ubiquitin carboxyl-terminal hydrolase 2/21, at 319,421 to 320,803 12044
Group Condition mRNA_3672 mRNA_3673 mRNA_3674 mRNA_3675 mRNA_3676
12040 12041 12042 12043 12044
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -1.1 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.3 -0.3 N.D.
growth on ypd YPD N.D. -0.4 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.4 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 +0.2 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.0 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.2 -0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.3 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.1 +0.0 N.D.
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.1 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.1 +0.3 N.D.
auxotrophy Dropout Complete N.D. +0.5 +0.5 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.5 -0.2 N.D.
auxotrophy YNB Glucose N.D. +0.3 +0.4 +0.4 N.D.
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