Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12041 and 12042 are separated by 535 nucleotides12042 and 12043 are separated by 477 nucleotides12043 and 12044 are separated by 1433 nucleotides12044 and 12045 are separated by 482 nucleotides mRNA_3673: 12041 - K11251 H2A histone H2A, at 313,222 to 314,004 12041 mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314,540 to 316,836 12042 mRNA_3675: 12043 - K11251 H2A histone H2A, at 317,314 to 317,987 12043 mRNA_3676: 12044 - K11833 USP2_21 ubiquitin carboxyl-terminal hydrolase 2/21, at 319,421 to 320,803 12044 mRNA_3677: 12045 - KOG0266 WD40 repeat-containing protein, at 321,286 to 323,880 12045
Group Condition mRNA_3673 mRNA_3674 mRNA_3675 mRNA_3676 mRNA_3677
12041 12042 12043 12044 12045
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.3 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.0 N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 -0.3 N.D. -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.1 +0.4 N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 +0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.4 -0.0 N.D. -0.1
growth on ypd YPD -0.4 -0.2 +0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 +0.3 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.3 -0.1 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.5 -0.3 N.D. -0.4
growth on oleic acid YNB Glucose +0.2 +0.1 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.5 -0.2 N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.1 +0.3 N.D. -0.1
auxotrophy Dropout Complete +0.5 +0.5 -0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.0 N.D. +0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 +0.7 N.D. +0.3
auxotrophy YNB Glucose +0.3 +0.4 +0.4 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.2 -0.0 N.D. +1.1
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