Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12043 and 12044 are separated by 1433 nucleotides12044 and 12045 are separated by 482 nucleotides12045 and 12046 are separated by 719 nucleotides12046 and 12047 are separated by 37 nucleotides mRNA_3675: 12043 - K11251 H2A histone H2A, at 317,314 to 317,987 12043 mRNA_3676: 12044 - K11833 USP2_21 ubiquitin carboxyl-terminal hydrolase 2/21, at 319,421 to 320,803 12044 mRNA_3677: 12045 - KOG0266 WD40 repeat-containing protein, at 321,286 to 323,880 12045 mRNA_3678: 12046 - K14530 RPP40 ribonucleases P/MRP protein subunit RPP40, at 324,600 to 326,289 12046 mRNA_3679: 12047 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 326,327 to 327,835 12047
Group Condition mRNA_3675 mRNA_3676 mRNA_3677 mRNA_3678 mRNA_3679
12043 12044 12045 12046 12047
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.7 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.4 N.D. -0.1
auxotrophy Dropout Complete -0.4 N.D. -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.4 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.1 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.1 N.D. -0.5
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.3 N.D. +0.0
auxotrophy YNB Glucose +0.4 N.D. -0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.6 N.D. -0.8
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +1.1 N.D. -1.1
growth on ypd YPD +0.1 N.D. +0.0 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.7 N.D. +0.3 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. +0.5 N.D. +0.2
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