Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12048 and 12049 are separated by 139 nucleotides12049 and 12050 are separated by 815 nucleotides12050 and 12051 are separated by 272 nucleotides12051 and 12052 are separated by 155 nucleotides mRNA_3680: 12048 - Hypothetical Protein, at 328,001 to 330,038 12048 mRNA_3681: 12049 - Hypothetical Protein, at 330,178 to 331,991 12049 mRNA_3682: 12050 - K07203 MTOR, FRAP, TOR serine/threonine-protein kinase mTOR, at 332,807 to 341,262 12050 mRNA_3683: 12051 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 341,535 to 343,207 12051 mRNA_3684: 12052 - K05955 FNTA protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, at 343,363 to 344,847 12052
Group Condition mRNA_3680 mRNA_3681 mRNA_3682 mRNA_3683 mRNA_3684
12048 12049 12050 12051 12052
auxotrophy YNB Glucose -1.4 +0.0 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.3 -0.1 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.3 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.6 -0.4 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.5 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.3 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 N.D. -0.2 N.D.
auxotrophy Dropout Complete -0.5 -0.0 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. -0.0 N.D.
growth on oleic acid YNB Glucose +0.3 +0.0 N.D. -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 N.D. +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. +0.2 N.D.
growth on ypd YPD +0.6 +0.4 N.D. -0.0 N.D.
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