Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12054 and 12055 are separated by 423 nucleotides12055 and 12056 are separated by 160 nucleotides12056 and 12057 are separated by 253 nucleotides12057 and 12058 are separated by 498 nucleotides mRNA_3686: 12054 - SUPERFAMILY--SSF54695, at 348,229 to 349,499 12054 mRNA_3687: 12055 - K14837 NOP12 nucleolar protein 12, at 349,923 to 352,122 12055 mRNA_3688: 12056 - KOG4285 Mitotic phosphoprotein, at 352,283 to 353,789 12056 mRNA_3689: 12057 - Hypothetical Protein, at 354,043 to 355,679 12057 mRNA_3690: 12058 - BLAST Ser/Thr protein kinase [Mucor ambiguus], at 356,178 to 360,570 12058
Group Condition mRNA_3686 mRNA_3687 mRNA_3688 mRNA_3689 mRNA_3690
12054 12055 12056 12057 12058
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -2.5 +0.0 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.4 -1.5 N.D. -0.1
growth on ypd YPD -0.3 -0.7 +0.2 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.9 -0.0 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.7 -0.6 N.D. -0.1
auxotrophy Dropout Complete +0.2 -0.1 +0.0 N.D. -0.3
auxotrophy YNB Glucose -0.0 +0.1 -0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.6 +0.1 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 -0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.7 -0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.9 -0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 -0.3 N.D. +0.1
growth on oleic acid YNB Glucose +0.0 +0.3 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.4 +0.0 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.8 +0.0 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +1.4 -0.4 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +1.4 -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +1.3 -0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +1.1 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +1.2 +0.4 N.D. -0.1
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