Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12055 and 12056 are separated by 160 nucleotides12056 and 12057 are separated by 253 nucleotides12057 and 12058 are separated by 498 nucleotides12058 and 12059 are separated by 5635 nucleotides mRNA_3687: 12055 - K14837 NOP12 nucleolar protein 12, at 349,923 to 352,122 12055 mRNA_3688: 12056 - KOG4285 Mitotic phosphoprotein, at 352,283 to 353,789 12056 mRNA_3689: 12057 - Hypothetical Protein, at 354,043 to 355,679 12057 mRNA_3690: 12058 - BLAST Ser/Thr protein kinase [Mucor ambiguus], at 356,178 to 360,570 12058 mRNA_3691: 12059 - K11839 USP8, UBP5 ubiquitin carboxyl-terminal hydrolase 8, at 366,206 to 370,520 12059
Group Condition mRNA_3687 mRNA_3688 mRNA_3689 mRNA_3690 mRNA_3691
12055 12056 12057 12058 12059
ypd buoyancy 40 hrs No Buoyancy Separation -2.5 +0.0 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -1.5 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.0 N.D. +0.1 N.D.
growth on ypd YPD -0.7 +0.2 N.D. -0.2 N.D.
auxotrophy Dropout Complete -0.1 +0.0 N.D. -0.3 N.D.
auxotrophy YNB Glucose +0.1 -0.0 N.D. -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.5 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.7 -0.6 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.0 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 N.D. +0.1 N.D.
growth on oleic acid YNB Glucose +0.3 +0.0 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.0 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.8 +0.0 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.9 -0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.3 -0.4 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 -0.1 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.4 -0.4 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.4 -0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 +0.4 N.D. -0.1 N.D.
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