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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12072 and 12073 are separated by 155 nucleotides
12073 and 12074 overlap by 11 nucleotides
12074 and 12075 are separated by 626 nucleotides
12075 and 12076 are separated by 327 nucleotides
mRNA_3704: 12072 - Hypothetical Protein, at 399,058 to 399,573
12072
mRNA_3705: 12073 - Hypothetical Protein, at 399,729 to 400,196
12073
mRNA_3706: 12074 - KOG1550 Extracellular protein SEL-1 and related proteins, at 400,186 to 402,852
12074
mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403,479 to 405,078
12075
mRNA_3708: 12076 - Hypothetical Protein, at 405,406 to 406,282
12076
Group
Condition
mRNA
_3704
mRNA
_3705
mRNA
_3706
mRNA
_3707
mRNA
_3708
12072
12073
12074
12075
12076
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
-0.9
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
-0.5
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.7
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
-0.6
N.D.
-0.1
growth on ypd
YPD
N.D.
-0.3
-0.2
N.D.
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.5
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-0.5
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.3
-0.4
N.D.
+0.2
auxotrophy
YNB Glucose
N.D.
+0.1
-0.6
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-0.2
N.D.
-0.2
auxotrophy
Dropout Complete
N.D.
+0.1
-0.0
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
+0.4
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.2
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
-0.0
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
-0.0
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
+0.3
N.D.
+0.2
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