Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12074 and 12075 are separated by 626 nucleotides12075 and 12076 are separated by 327 nucleotides12076 and 12077 are separated by 303 nucleotides12077 and 12078 are separated by 247 nucleotides mRNA_3706: 12074 - KOG1550 Extracellular protein SEL-1 and related proteins, at 400,186 to 402,852 12074 mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403,479 to 405,078 12075 mRNA_3708: 12076 - Hypothetical Protein, at 405,406 to 406,282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406,586 to 407,790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078
Group Condition mRNA_3706 mRNA_3707 mRNA_3708 mRNA_3709 mRNA_3710
12074 12075 12076 12077 12078
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 N.D. -0.3 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.7 N.D. -0.0 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose -0.5 N.D. +0.0 -0.4 N.D.
growth on ypd YPD -0.2 N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.0 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. -0.1 +0.2 N.D.
auxotrophy YNB Glucose -0.6 N.D. +0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. +0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.2 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.1 -0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.4 N.D. -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. +0.1 +0.6 N.D.
auxotrophy Dropout Complete -0.0 N.D. -0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. +0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.3 +0.3 N.D.
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