Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12075 and 12076 are separated by 327 nucleotides12076 and 12077 are separated by 303 nucleotides12077 and 12078 are separated by 247 nucleotides12078 and 12079 are separated by 38 nucleotides mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403,479 to 405,078 12075 mRNA_3708: 12076 - Hypothetical Protein, at 405,406 to 406,282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406,586 to 407,790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,733 to 409,937 12079
Group Condition mRNA_3707 mRNA_3708 mRNA_3709 mRNA_3710 mRNA_3711
12075 12076 12077 12078 12079
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.4 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.3 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 -0.4 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.2 N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.3 N.D. -0.1
growth on ypd YPD N.D. -0.2 -0.1 N.D. +0.2
growth on oleic acid YNB Glucose N.D. +0.0 -0.4 N.D. +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.0 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.3 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.2 N.D. +0.3
auxotrophy Dropout Complete N.D. -0.2 +0.3 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.2 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.0 N.D. +0.1
auxotrophy YNB Glucose N.D. +0.1 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.3 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.6 N.D. +0.3
remove
mRNA_3707
plot
remove
mRNA_3708
plot
remove
mRNA_3709
remove
mRNA_3710
plot
remove
mRNA_3711
plot