Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12076 and 12077 are separated by 303 nucleotides12077 and 12078 are separated by 247 nucleotides12078 and 12079 are separated by 38 nucleotides12079 and 12080 are separated by 216 nucleotides mRNA_3708: 12076 - Hypothetical Protein, at 405,406 to 406,282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406,586 to 407,790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,733 to 409,937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410,154 to 411,574 12080
Group Condition mRNA_3708 mRNA_3709 mRNA_3710 mRNA_3711 mRNA_3712
12076 12077 12078 12079 12080
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.3 N.D. -0.1 N.D.
growth on ypd YPD -0.2 -0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 -0.4 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.2 N.D. +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 N.D. +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 N.D. +0.3 N.D.
auxotrophy Dropout Complete -0.2 +0.3 N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 N.D. +0.1 N.D.
auxotrophy YNB Glucose +0.1 +0.1 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.6 N.D. +0.3 N.D.
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