Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12077 and 12078 are separated by 247 nucleotides12078 and 12079 are separated by 38 nucleotides12079 and 12080 are separated by 216 nucleotides12080 and 12081 are separated by 255 nucleotides mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406,586 to 407,790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,733 to 409,937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410,154 to 411,574 12080 mRNA_3713: 12081 - KOG4756 Mitochondrial ribosomal protein L27, at 411,830 to 412,320 12081
Group Condition mRNA_3709 mRNA_3710 mRNA_3711 mRNA_3712 mRNA_3713
12077 12078 12079 12080 12081
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.3 N.D. N.D.
growth on ypd YPD -0.1 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.0 N.D. N.D.
auxotrophy YNB Glucose +0.1 N.D. +0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.5 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.3 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. +0.3 N.D. N.D.
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