Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12078 and 12079 are separated by 38 nucleotides12079 and 12080 are separated by 216 nucleotides12080 and 12081 are separated by 255 nucleotides12081 and 12082 are separated by 503 nucleotides mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,038 to 408,694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408,733 to 409,937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410,154 to 411,574 12080 mRNA_3713: 12081 - KOG4756 Mitochondrial ribosomal protein L27, at 411,830 to 412,320 12081 mRNA_3714: 12082 - K14006 SEC23 protein transport protein SEC23, at 412,824 to 415,636 12082
Group Condition mRNA_3710 mRNA_3711 mRNA_3712 mRNA_3713 mRNA_3714
12078 12079 12080 12081 12082
ypd buoyancy 40 hrs High Buoyancy N.D. -0.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 N.D. N.D. N.D.
auxotrophy Dropout Complete N.D. +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. N.D. N.D.
growth on ypd YPD N.D. +0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose N.D. +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 N.D. N.D. N.D.
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