Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12088 and 12089 are separated by 216 nucleotides12089 and 12090 are separated by 430 nucleotides12090 and 12091 are separated by 319 nucleotides12091 and 12092 are separated by 2144 nucleotides mRNA_3720: 12088 - HMMPfam-Conserved hypothetical protein (DUF2461)-PF09365,TIGRFAM-TIGR02453 TIGR02453 family protein-TIGR02453, at 427,096 to 428,543 12088 mRNA_3721: 12089 - K14544 UTP22, NOL6 U3 small nucleolar RNA-associated protein 22, at 428,760 to 433,033 12089 mRNA_3722: 12090 - K11251 H2A histone H2A, at 433,464 to 434,074 12090 mRNA_3723: 12091 - K11252 H2B histone H2B, at 434,394 to 435,035 12091 mRNA_3724: 12092 - KOG1744 Histone H2B, at 437,180 to 437,338 12092
Group Condition mRNA_3720 mRNA_3721 mRNA_3722 mRNA_3723 mRNA_3724
12088 12089 12090 12091 12092
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.8 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.5 N.D. N.D.
auxotrophy Dropout Complete -0.2 N.D. -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -0.7 N.D. N.D.
growth on oleic acid YNB Glucose -0.3 N.D. -0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.3 N.D. N.D.
auxotrophy YNB Glucose +0.0 N.D. -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.1 N.D. N.D.
growth on ypd YPD +0.0 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.6 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +1.0 N.D. N.D.
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