Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12092 and 12093 are separated by 416 nucleotides12093 and 12094 are separated by 80 nucleotides12094 and 12095 are separated by 484 nucleotides12095 and 12096 are separated by 73 nucleotides mRNA_3724: 12092 - KOG1744 Histone H2B, at 437,180 to 437,338 12092 mRNA_3725: 12093 - K18168 SDHAF2, SDH5 succinate dehydrogenase assembly factor 2, at 437,755 to 438,417 12093 mRNA_3726: 12094 - K04082 hscB, HSCB, HSC20 molecular chaperone HscB, at 438,498 to 439,465 12094 mRNA_3727: 12095 - SMART-Leucine rich repeat, ribonuclease inhibitor type-SM00368,SUPERFAMILY--SSF52047, at 439,950 to 441,597 12095 mRNA_3728: 12096 - K11142 LAP3 cytosol aminopeptidase, at 441,671 to 443,858 12096
Group Condition mRNA_3724 mRNA_3725 mRNA_3726 mRNA_3727 mRNA_3728
12092 12093 12094 12095 12096
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. -1.1 -0.3
growth on ypd YPD N.D. N.D. N.D. -1.2 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.7 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.6 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 +0.0
growth on oleic acid YNB Glucose N.D. N.D. N.D. +0.2 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.3 -0.1
auxotrophy Dropout Complete N.D. N.D. N.D. +0.5 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. +0.3 +0.0
auxotrophy YNB Glucose N.D. N.D. N.D. +0.8 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. +0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.6 +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. +0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. +0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. +0.6 +0.4
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