Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12100 and 12101 are separated by 405 nucleotides12101 and 12102 are separated by 482 nucleotides12102 and 12103 are separated by 152 nucleotides12103 and 12104 are separated by 247 nucleotides mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453,754 to 456,999 12100 mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457,405 to 460,471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460,954 to 461,748 12102 mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461,901 to 463,089 12103 mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463,337 to 464,527 12104
Group Condition mRNA_3732 mRNA_3733 mRNA_3734 mRNA_3735 mRNA_3736
12100 12101 12102 12103 12104
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.2 -1.0 -0.8
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.0 -0.7 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.0 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.6 +0.3 -1.9
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.1 -0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.3 -0.3 -0.0
growth on oleic acid YNB Glucose N.D. -0.1 -0.0 +0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.3 +0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.2 -0.3 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.5 -0.0 -0.5
auxotrophy YNB Glucose N.D. -0.4 +0.2 +0.3 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.4 +0.3 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.0 -0.2 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 +0.4 +0.4 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.3 +0.6 +0.5
growth on ypd YPD N.D. -0.1 -0.1 -0.7 +1.7
auxotrophy Dropout Complete N.D. -0.2 +0.4 +0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.7 -0.3 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.0 +0.5 +1.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.3 +0.4 +0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.5 +0.3 +1.0
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