Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12101 and 12102 are separated by 482 nucleotides12102 and 12103 are separated by 152 nucleotides12103 and 12104 are separated by 247 nucleotides12104 and 12105 are separated by 269 nucleotides mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457,405 to 460,471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460,954 to 461,748 12102 mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461,901 to 463,089 12103 mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463,337 to 464,527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464,797 to 466,425 12105
Group Condition mRNA_3733 mRNA_3734 mRNA_3735 mRNA_3736 mRNA_3737
12101 12102 12103 12104 12105
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 -0.7 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -1.0 -0.8 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.6 +0.3 -1.9 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 -0.3 -0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 -0.2 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -0.5 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 -0.2 +0.1 -0.5 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.5 -0.0 -0.5 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 -0.3 +0.8 -0.4
growth on oleic acid YNB Glucose -0.1 -0.0 +0.2 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.3 +0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.4 +0.4 -0.3 -0.6
growth on oleic acid YNB Oleic Acid -0.0 -0.4 +0.3 +0.4 -0.0
auxotrophy Dropout Complete -0.2 +0.4 +0.7 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.6 +0.5 -0.4
auxotrophy YNB Glucose -0.4 +0.2 +0.3 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.0 +0.5 +1.0 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.7 -0.3 +0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +0.4 +0.6 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.5 +0.3 +1.0 +0.6
growth on ypd YPD -0.1 -0.1 -0.7 +1.7 +2.9
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