Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12102 and 12103 are separated by 152 nucleotides12103 and 12104 are separated by 247 nucleotides12104 and 12105 are separated by 269 nucleotides12105 and 12106 are separated by 258 nucleotides mRNA_3734: 12102 - Interpro Protein HRI1, at 460,954 to 461,748 12102 mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461,901 to 463,089 12103 mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463,337 to 464,527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464,797 to 466,425 12105 mRNA_3738: 12106 - K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D, at 466,684 to 467,899 12106
Group Condition mRNA_3734 mRNA_3735 mRNA_3736 mRNA_3737 mRNA_3738
12102 12103 12104 12105 12106
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.1 -0.5 -1.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.3 -1.9 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -1.0 -0.8 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.7 -0.4 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.5 -0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.0 -0.5 -1.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.3 -0.0 -0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 -0.4 -0.5 N.D.
growth on oleic acid YNB Glucose -0.0 +0.2 -0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.4 -0.3 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 +0.8 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.3 -0.4 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.3 +0.4 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.6 +0.5 -0.4 N.D.
auxotrophy Dropout Complete +0.4 +0.7 -0.1 -0.5 N.D.
auxotrophy YNB Glucose +0.2 +0.3 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.3 +0.6 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.5 +1.0 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.4 +0.6 +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.3 +1.0 +0.6 N.D.
growth on ypd YPD -0.1 -0.7 +1.7 +2.9 N.D.
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