Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12104 and 12105 are separated by 269 nucleotides12105 and 12106 are separated by 258 nucleotides12106 and 12107 are separated by 533 nucleotides12107 and 12108 are separated by 313 nucleotides mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463,337 to 464,527 12104 mRNA_3737: 12105 - BLAST TPR-2 domain protein [Rhizoctonia solani AG-3 Rhs1AP], at 464,797 to 466,425 12105 mRNA_3738: 12106 - K06689 UBE2D, UBC4, UBC5 ubiquitin-conjugating enzyme E2 D, at 466,684 to 467,899 12106 mRNA_3739: 12107 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,ProSiteProfiles-Expansin, family-45 endoglucanase-like domain profile.-PS50842,SUPERFAMILY--SSF50685, at 468,433 to 469,585 12107 mRNA_3740: 12108 - Hypothetical Protein, at 469,899 to 470,347 12108
Group Condition mRNA_3736 mRNA_3737 mRNA_3738 mRNA_3739 mRNA_3740
12104 12105 12106 12107 12108
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.9 -0.8 N.D. -0.8 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -1.4 N.D. -1.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -1.1 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.6 N.D. -0.5 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.6 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.1 N.D. -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.9 N.D. -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.5 N.D. -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 N.D. -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 N.D. +0.1 +0.0
growth on oleic acid YNB Glucose -0.5 +0.1 N.D. -0.2 +0.1
auxotrophy Dropout Complete -0.1 -0.5 N.D. +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.1 N.D. -0.6 +0.2
auxotrophy YNB Glucose +0.1 +0.2 N.D. -0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.4 N.D. +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.6 N.D. -0.4 +0.0
growth on oleic acid YNB Oleic Acid +0.4 -0.0 N.D. +0.4 +0.4
growth on ricinoleic acid YNB Glucose +0.5 -0.4 N.D. +1.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -0.4 N.D. +0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy +1.0 +0.6 N.D. -0.0 +0.1
growth on ypd YPD +1.7 +2.9 N.D. +0.3 +0.1
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