Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12112 and 12113 are separated by 241 nucleotides12113 and 12114 are separated by 246 nucleotides12114 and 12115 are separated by 749 nucleotides12115 and 12116 are separated by 808 nucleotides mRNA_3744: 12112 - KOG0955 PHD finger protein BR140/LIN-49, at 479,560 to 485,967 12112 mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486,209 to 486,880 12113 mRNA_3746: 12114 - Hypothetical Protein, at 487,127 to 488,004 12114 mRNA_3747: 12115 - Hypothetical Protein, at 488,754 to 489,655 12115 mRNA_3748: 12116 - K00658 DLST, sucB 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), at 490,464 to 492,382 12116
Group Condition mRNA_3744 mRNA_3745 mRNA_3746 mRNA_3747 mRNA_3748
12112 12113 12114 12115 12116
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.2 -1.3 -0.2 N.D.
auxotrophy Dropout Complete +0.6 -1.6 -0.5 -0.1 N.D.
auxotrophy YNB Glucose +0.2 -1.3 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -1.1 -0.3 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 -1.3 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.8 -1.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 -0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.8 -0.6 -0.4 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.4 -0.4 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.7 +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.4 +0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.5 +0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.4 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.7 -0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.9 -0.2 +0.4 N.D.
growth on ypd YPD -0.1 +0.3 +0.4 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.1 +0.8 +0.8 -0.0 N.D.
growth on oleic acid YNB Glucose +0.4 -0.1 +0.3 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.3 +0.1 +0.2 N.D.
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