Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12114 and 12115 are separated by 749 nucleotides12115 and 12116 are separated by 808 nucleotides12116 and 12117 are separated by 377 nucleotides12117 and 12118 are separated by 84 nucleotides mRNA_3746: 12114 - Hypothetical Protein, at 487,127 to 488,004 12114 mRNA_3747: 12115 - Hypothetical Protein, at 488,754 to 489,655 12115 mRNA_3748: 12116 - K00658 DLST, sucB 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), at 490,464 to 492,382 12116 mRNA_3749: 12117 - HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850, at 492,760 to 497,695 12117 mRNA_3750: 12118 - K13421 UMPS uridine monophosphate synthetase, at 497,780 to 498,794 12118
Group Condition mRNA_3746 mRNA_3747 mRNA_3748 mRNA_3749 mRNA_3750
12114 12115 12116 12117 12118
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -0.1 N.D. -0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.2 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 N.D. -0.3 N.D.
auxotrophy Dropout Complete -0.5 -0.1 N.D. -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.4 -0.1 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.2 N.D. -0.0 N.D.
auxotrophy YNB Glucose -0.2 -0.1 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -0.3 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.1 N.D. -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose +0.3 -0.0 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.0 N.D. -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 N.D. +0.0 N.D.
growth on ypd YPD +0.4 -0.3 N.D. +0.0 N.D.
remove
mRNA_3746
plot		 remove
mRNA_3747
plot		 remove
mRNA_3748		 remove
mRNA_3749
plot		 remove
mRNA_3750
plot