Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12122 and 12123 are separated by 334 nucleotides12123 and 12124 are separated by 72 nucleotides12124 and 12125 are separated by 552 nucleotides12125 and 12126 are separated by 849 nucleotides mRNA_3754: 12122 - K01641 E2.3.3.10 hydroxymethylglutaryl-CoA synthase, at 509,040 to 510,998 12122 mRNA_3755: 12123 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 511,333 to 513,065 12123 mRNA_3756: 12124 - HMMPfam-Protein of unknown function (DUF2665)-PF11654, at 513,138 to 513,518 12124 mRNA_3757: 12125 - Hypothetical Protein, at 514,071 to 514,868 12125 mRNA_3758: 12126 - HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208, at 515,718 to 518,534 12126
Group Condition mRNA_3754 mRNA_3755 mRNA_3756 mRNA_3757 mRNA_3758
12122 12123 12124 12125 12126
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.6 N.D. -1.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.9 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.7 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.6 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.6 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.3 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.1 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.2 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.1 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.3 N.D. +0.0
growth on oleic acid YNB Glucose N.D. N.D. +0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.3 N.D. -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 N.D. +0.2
auxotrophy Dropout Complete N.D. N.D. +0.3 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.6 N.D. +0.0
auxotrophy YNB Glucose N.D. N.D. +0.6 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 N.D. +0.4
growth on ypd YPD N.D. N.D. +1.9 N.D. +0.2
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