Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12124 and 12125 are separated by 552 nucleotides12125 and 12126 are separated by 849 nucleotides12126 and 12127 are separated by 86 nucleotides12127 and 12128 are separated by 568 nucleotides mRNA_3756: 12124 - HMMPfam-Protein of unknown function (DUF2665)-PF11654, at 513,138 to 513,518 12124 mRNA_3757: 12125 - Hypothetical Protein, at 514,071 to 514,868 12125 mRNA_3758: 12126 - HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208, at 515,718 to 518,534 12126 mRNA_3759: 12127 - Hypothetical Protein, at 518,621 to 520,492 12127 mRNA_3760: 12128 - K10746 EXO1 exonuclease 1, at 521,061 to 522,364 12128
Group Condition mRNA_3756 mRNA_3757 mRNA_3758 mRNA_3759 mRNA_3760
12124 12125 12126 12127 12128
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. -1.7 -0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. -0.4 +0.2 -1.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.2 +0.1 -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. -0.3 -0.5 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.6 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.4 +0.0 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 N.D. -0.5 -0.0 +0.3
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.2 -0.2 -0.8
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.2 -0.2 -0.5
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.2 -0.1 -0.8
growth on oleic acid YNB Glucose +0.1 N.D. -0.2 -0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.6 N.D. -0.2 -0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. +0.4 +0.1 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. -0.2 -0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.2 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.0 -0.1 +0.1
auxotrophy YNB Glucose +0.6 N.D. +0.2 -0.4 -0.3
auxotrophy Dropout Complete +0.3 N.D. -0.0 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 +0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.6 N.D. +0.0 -0.2 +0.3
growth on ypd YPD +1.9 N.D. +0.2 +0.4 +0.1
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