Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12128 and 12129 are separated by 295 nucleotides12129 and 12130 are separated by 413 nucleotides12130 and 12131 are separated by 343 nucleotides12131 and 12132 are separated by 155 nucleotides mRNA_3760: 12128 - K10746 EXO1 exonuclease 1, at 521,061 to 522,364 12128 mRNA_3761: 12129 - K20520 DBNL, ABP1 drebrin-like protein, at 522,660 to 525,046 12129 mRNA_3762: 12130 - Hypothetical Protein, at 525,460 to 525,822 12130 mRNA_3763: 12131 - Hypothetical Protein, at 526,166 to 531,244 12131 mRNA_3764: 12132 - K11808 ADE2 phosphoribosylaminoimidazole carboxylase, at 531,400 to 533,650 12132
Group Condition mRNA_3760 mRNA_3761 mRNA_3762 mRNA_3763 mRNA_3764
12128 12129 12130 12131 12132
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 -0.9 N.D. -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.2 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.2 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.0 N.D. -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.8 -0.0 N.D. -0.5 N.D.
growth on oleic acid YNB Glucose -0.5 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.8 -0.1 N.D. +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.0 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.0 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.5 N.D. -0.2 N.D.
auxotrophy YNB Glucose -0.3 +0.3 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 N.D. -0.1 N.D.
growth on ypd YPD +0.1 -0.2 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 N.D. +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 N.D. +0.1 N.D.
auxotrophy Dropout Complete +0.3 +0.3 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.4 N.D. +0.3 N.D.
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