Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12135 and 12136 are separated by 173 nucleotides12136 and 12137 are separated by 195 nucleotides12137 and 12138 are separated by 303 nucleotides12138 and 12139 are separated by 968 nucleotides mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536,936 to 539,895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540,069 to 541,238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541,434 to 542,462 12137 mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542,766 to 544,325 12138 mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545,294 to 546,306 12139
Group Condition mRNA_3767 mRNA_3768 mRNA_3769 mRNA_3770 mRNA_3771
12135 12136 12137 12138 12139
growth on oleic acid YNB Glucose +0.1 -0.2 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.4 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.7 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 N.D. +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 N.D. -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. +0.2 N.D.
growth on ypd YPD +0.6 -0.3 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.6 N.D. +1.0 N.D.
auxotrophy YNB Glucose +0.3 +0.1 N.D. +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 N.D. +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 N.D. +1.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 N.D. +0.9 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 N.D. +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 N.D. +1.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 N.D. +0.9 N.D.
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