Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12136 and 12137 are separated by 195 nucleotides12137 and 12138 are separated by 303 nucleotides12138 and 12139 are separated by 968 nucleotides12139 and 12140 are separated by 146 nucleotides mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540,069 to 541,238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541,434 to 542,462 12137 mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542,766 to 544,325 12138 mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545,294 to 546,306 12139 mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546,453 to 547,644 12140
Group Condition mRNA_3768 mRNA_3769 mRNA_3770 mRNA_3771 mRNA_3772
12136 12137 12138 12139 12140
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.0 N.D. -2.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. +1.2 N.D. -2.2
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.0 N.D. -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.2 N.D. -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.4 N.D. -0.8
growth on oleic acid YNB Glucose -0.2 N.D. -0.4 N.D. -0.5
auxotrophy Dropout Complete -0.2 N.D. +0.1 N.D. -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.1 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.6 N.D. +1.0 N.D. -1.0
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.2 N.D. -1.0
growth on ypd YPD -0.3 N.D. +0.0 N.D. +0.0
auxotrophy YNB Glucose +0.1 N.D. +0.3 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +0.3 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.6 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.9 N.D. -0.7
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.5 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +1.0 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. -0.4 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. +0.9 N.D. -0.1
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