Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12138 and 12139 are separated by 968 nucleotides12139 and 12140 are separated by 146 nucleotides12140 and 12141 are separated by 157 nucleotides12141 and 12142 are separated by 1622 nucleotides mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542,766 to 544,325 12138 mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545,294 to 546,306 12139 mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546,453 to 547,644 12140 mRNA_3773: 12141 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 547,802 to 549,606 12141 mRNA_3774: 12142 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 551,229 to 552,274 12142
Group Condition mRNA_3770 mRNA_3771 mRNA_3772 mRNA_3773 mRNA_3774
12138 12139 12140 12141 12142
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -1.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.8 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -2.4 +1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 N.D. -2.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -1.0 +0.1 N.D.
growth on oleic acid YNB Glucose -0.4 N.D. -0.5 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. -0.7 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.9 +0.6 N.D.
auxotrophy Dropout Complete +0.1 N.D. -0.8 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.5 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +1.0 N.D. -0.3 -0.9 N.D.
auxotrophy YNB Glucose +0.3 N.D. -0.6 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. -0.8 +0.2 N.D.
growth on ypd YPD +0.0 N.D. +0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. +0.0 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +1.0 N.D. -1.0 +0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.9 N.D. -0.7 +0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 N.D. -0.1 +0.4 N.D.
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