Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12139 and 12140 are separated by 146 nucleotides12140 and 12141 are separated by 157 nucleotides12141 and 12142 are separated by 1622 nucleotides12142 and 12143 are separated by 663 nucleotides mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545,294 to 546,306 12139 mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546,453 to 547,644 12140 mRNA_3773: 12141 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 547,802 to 549,606 12141 mRNA_3774: 12142 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 551,229 to 552,274 12142 mRNA_3775: 12143 - KOG2913 Predicted membrane protein, at 552,938 to 553,662 12143
Group Condition mRNA_3771 mRNA_3772 mRNA_3773 mRNA_3774 mRNA_3775
12139 12140 12141 12142 12143
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -2.2 +0.1 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -2.4 +1.0 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.9 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -1.0 +0.1 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.2 -0.4 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.8 -0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.1 N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.9 +0.6 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.8 +0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid N.D. -1.0 +0.6 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.7 -0.1 N.D. +0.4
auxotrophy YNB Glucose N.D. -0.6 +0.2 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 +0.2 N.D. +0.1
auxotrophy Dropout Complete N.D. -0.8 +0.4 N.D. +0.1
growth on oleic acid YNB Glucose N.D. -0.5 +0.2 N.D. +0.1
growth on ypd YPD N.D. +0.0 +0.0 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.7 +0.6 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.4 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.1 N.D. +0.2
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