Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12142 and 12143 are separated by 663 nucleotides12143 and 12144 are separated by 292 nucleotides12144 and 12145 are separated by 605 nucleotides12145 and 12146 are separated by 450 nucleotides mRNA_3774: 12142 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 551,229 to 552,274 12142 mRNA_3775: 12143 - KOG2913 Predicted membrane protein, at 552,938 to 553,662 12143 mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553,955 to 556,574 12144 mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557,180 to 558,034 12145 mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558,485 to 559,797 12146
Group Condition mRNA_3774 mRNA_3775 mRNA_3776 mRNA_3777 mRNA_3778
12142 12143 12144 12145 12146
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 -1.1 -2.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 -0.2 -0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.8 +0.7 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.2 -1.7 +0.2
growth on ypd YPD N.D. -0.2 -0.3 +0.0 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.2 -1.2 +0.8 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.5 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.6 +1.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.0 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.9 -0.0 +0.6
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.5 +0.4 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.4 +0.1 +0.8 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 +0.1 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.3 +0.6 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.3 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.2 +0.7 +0.4
growth on oleic acid YNB Glucose N.D. +0.1 -0.0 +0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.2 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 -0.2 +0.6 -0.1
auxotrophy YNB Glucose N.D. -0.0 +0.5 +0.7 -0.0
auxotrophy Dropout Complete N.D. +0.1 +0.3 +1.0 -0.1
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