Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12146 and 12147 are separated by 774 nucleotides12147 and 12148 are separated by 246 nucleotides12148 and 12149 are separated by 1587 nucleotides12149 and 12150 are separated by 353 nucleotides mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558,485 to 559,797 12146 mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560,572 to 561,347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561,594 to 563,970 12148 mRNA_3781: 12149 - K12821 PRPF40, PRP40 pre-mRNA-processing factor 40, at 565,558 to 568,249 12149 mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568,603 to 571,218 12150
Group Condition mRNA_3778 mRNA_3779 mRNA_3780 mRNA_3781 mRNA_3782
12146 12147 12148 12149 12150
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 N.D. -0.3 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.2 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.8 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. -0.1 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.1 -0.2 N.D.
growth on ypd YPD -0.3 N.D. -0.0 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. +0.3 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. +0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.0 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.1 +0.2 N.D.
auxotrophy YNB Glucose -0.0 N.D. +0.1 +0.5 N.D.
auxotrophy Dropout Complete -0.1 N.D. +0.0 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. +0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.1 +0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.3 +0.9 N.D.
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