Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12150 and 12151 are separated by 926 nucleotides12151 and 12152 are separated by 510 nucleotides12152 and 12153 are separated by 357 nucleotides12153 and 12154 are separated by 515 nucleotides mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568,603 to 571,218 12150 mRNA_3783: 12151 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 572,145 to 573,439 12151 mRNA_3784: 12152 - KOG1188 WD40 repeat protein, at 573,950 to 575,324 12152 mRNA_3785: 12153 - K15178 RTF1 RNA polymerase-associated protein RTF1, at 575,682 to 577,961 12153 mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578,477 to 580,207 12154
Group Condition mRNA_3782 mRNA_3783 mRNA_3784 mRNA_3785 mRNA_3786
12150 12151 12152 12153 12154
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 N.D. -0.2 -4.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. -1.2 -2.9
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 N.D. -0.5 -2.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. -1.0 -1.7
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. -0.7 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.7 N.D. -0.5 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. -2.3 +1.4
growth on oleic acid YNB Oleic Acid N.D. +0.0 N.D. +0.5 -1.4
growth on ypd YPD N.D. +0.2 N.D. -0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 N.D. +0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. +0.6 -1.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 N.D. -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 N.D. +0.0 -0.1
growth on oleic acid YNB Glucose N.D. +0.2 N.D. +0.6 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. +0.7 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 N.D. +0.4 -0.0
auxotrophy YNB Glucose N.D. +0.5 N.D. -0.1 +0.5
auxotrophy Dropout Complete N.D. +0.8 N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 N.D. -0.5 +1.8
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