Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12152 and 12153 are separated by 357 nucleotides
12153 and 12154 are separated by 515 nucleotides
12154 and 12155 are separated by 977 nucleotides
12155 and 12156 are separated by 56 nucleotides
mRNA_3784: 12152 - KOG1188 WD40 repeat protein, at 573,950 to 575,324
12152
mRNA_3785: 12153 - K15178 RTF1 RNA polymerase-associated protein RTF1, at 575,682 to 577,961
12153
mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578,477 to 580,207
12154
mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581,185 to 583,154
12155
mRNA_3788: 12156 - Hypothetical Protein, at 583,211 to 584,056
12156
Group
Condition
mRNA
_3784
mRNA
_3785
mRNA
_3786
mRNA
_3787
mRNA
_3788
12152
12153
12154
12155
12156
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.2
-2.9
-0.0
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-4.2
+0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.5
-1.3
-0.7
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
-2.6
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.0
-1.7
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-2.3
+1.4
-0.2
-1.4
growth on ricinoleic acid
YNB Glucose
N.D.
-0.7
-0.3
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.3
+0.3
-1.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.4
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.6
-1.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.4
+0.5
-0.5
auxotrophy
YNB Glucose
N.D.
-0.1
+0.5
-0.3
-0.2
growth on ypd
YPD
N.D.
-0.7
-0.1
-0.3
+1.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
-1.4
+0.6
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.3
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
+0.3
+0.2
auxotrophy
Dropout Complete
N.D.
+0.3
+0.2
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.7
+0.2
-0.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.6
-0.4
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.5
+1.8
+0.2
-0.4
remove
mRNA_3784
plot
remove
mRNA_3785
plot
remove
mRNA_3786
remove
mRNA_3787
plot
remove
mRNA_3788
plot