Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12154 and 12155 are separated by 977 nucleotides12155 and 12156 are separated by 56 nucleotides12156 and 12157 are separated by 290 nucleotides12157 and 12158 are separated by 537 nucleotides mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578,477 to 580,207 12154 mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581,185 to 583,154 12155 mRNA_3788: 12156 - Hypothetical Protein, at 583,211 to 584,056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584,347 to 585,517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586,055 to 588,728 12158
Group Condition mRNA_3786 mRNA_3787 mRNA_3788 mRNA_3789 mRNA_3790
12154 12155 12156 12157 12158
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.7 -0.8 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -4.2 +0.3 +0.0 +1.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -2.6 +0.3 -0.2 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -2.9 -0.0 -0.6 +1.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.7 -0.1 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 -1.0 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.0 +0.2 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.5 -0.5 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 -0.2 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 -0.0 -0.4 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -1.4 +0.6 +0.2 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.4 -0.2 -1.4 +0.0 N.D.
auxotrophy YNB Glucose +0.5 -0.3 -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.5 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.0 -0.1 +0.1 N.D.
auxotrophy Dropout Complete +0.2 -0.1 +0.2 +0.2 N.D.
growth on oleic acid YNB Glucose -0.4 +0.5 +0.2 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.2 +0.5 N.D.
growth on ypd YPD -0.1 -0.3 +1.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.8 +0.2 -0.4 +0.1 N.D.
remove
mRNA_3786
plot
remove
mRNA_3787
plot
remove
mRNA_3788
remove
mRNA_3789
plot
remove
mRNA_3790
plot