Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12155 and 12156 are separated by 56 nucleotides12156 and 12157 are separated by 290 nucleotides12157 and 12158 are separated by 537 nucleotides12158 and 12159 are separated by 128 nucleotides mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581,185 to 583,154 12155 mRNA_3788: 12156 - Hypothetical Protein, at 583,211 to 584,056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584,347 to 585,517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586,055 to 588,728 12158 mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588,857 to 589,593 12159
Group Condition mRNA_3787 mRNA_3788 mRNA_3789 mRNA_3790 mRNA_3791
12155 12156 12157 12158 12159
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.8 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.4 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -1.0 -0.2 N.D. N.D.
auxotrophy YNB Glucose -0.3 -0.2 +0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.5 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.4 +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.4 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.2 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.3 N.D. N.D.
auxotrophy Dropout Complete -0.1 +0.2 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.2 N.D. N.D.
growth on oleic acid YNB Glucose +0.5 +0.2 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.6 +1.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.5 N.D. N.D.
growth on ypd YPD -0.3 +1.0 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.6 +0.2 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 +1.0 N.D. N.D.
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