Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12158 and 12159 are separated by 128 nucleotides12159 and 12160 are separated by 414 nucleotides12160 and 12161 are separated by 343 nucleotides12161 and 12162 are separated by 178 nucleotides mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586,055 to 588,728 12158 mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588,857 to 589,593 12159 mRNA_3792: 12160 - K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5, at 590,008 to 594,469 12160 mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594,813 to 596,952 12161 mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597,131 to 597,697 12162
Group Condition mRNA_3790 mRNA_3791 mRNA_3792 mRNA_3793 mRNA_3794
12158 12159 12160 12161 12162
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.1 -0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.8 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 -0.3 -0.5
auxotrophy YNB Glucose N.D. N.D. +0.1 -0.3 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.5 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.6 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.4 +0.1 -0.3
auxotrophy Dropout Complete N.D. N.D. +0.1 +0.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.6 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.3 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.5 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.7 -0.6 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.6 +0.1 +0.0
growth on ypd YPD N.D. N.D. +0.6 +0.3 -0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.6 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.6 -0.5 +0.9
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.5 -0.0 +0.6
remove
mRNA_3790
plot
remove
mRNA_3791
plot
remove
mRNA_3792
remove
mRNA_3793
plot
remove
mRNA_3794
plot