Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12158 and 12159 are separated by 128 nucleotides
12159 and 12160 are separated by 414 nucleotides
12160 and 12161 are separated by 343 nucleotides
12161 and 12162 are separated by 178 nucleotides
mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586,055 to 588,728
12158
mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588,857 to 589,593
12159
mRNA_3792: 12160 - K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5, at 590,008 to 594,469
12160
mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594,813 to 596,952
12161
mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597,131 to 597,697
12162
Group
Condition
mRNA
_3790
mRNA
_3791
mRNA
_3792
mRNA
_3793
mRNA
_3794
12158
12159
12160
12161
12162
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-1.1
-0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.8
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.4
-0.3
-0.5
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.2
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.5
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
+0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
+0.1
-0.3
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
+0.0
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.6
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.3
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
-0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.5
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.7
-0.6
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.6
+0.1
+0.0
growth on ypd
YPD
N.D.
N.D.
+0.6
+0.3
-0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.6
-0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.6
-0.5
+0.9
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.5
-0.0
+0.6
remove
mRNA_3790
plot
remove
mRNA_3791
plot
remove
mRNA_3792
remove
mRNA_3793
plot
remove
mRNA_3794
plot